:SELECT 
  term.*, correlated_term.*, count(distinct association2.gene_product_id) AS correlated_term__gpcount
  
:FROM
  term
  INNER JOIN association AS association1 ON (association1.term_id = term.id)
  INNER JOIN association AS association2 ON (association1.gene_product_id = association2.gene_product_id)
  INNER JOIN term AS correlated_term ON (association2.term_id = correlated_term.id)

:WHERE
    [association1.term_id != association2.term_id]
    [term.id != correlated_term.id]
    [term.acc = &term_acc&]
    [term.name = &term_name&]
    [correlated_term.term_type = &correlated_term_type&]
    [correlated_term.acc = &correlated_term_acc&]
    [correlated_term.name = &correlated_term_name&]
    [association1.is_not = 0]
    [association2.is_not = 0]
:GROUP BY term.id,correlated_term.id
:USE NESTING (set(term(correlated_term)))

//
schema: go
desc: given a GO term, fetch other GO terms associated with the same gene_product.
      will also summarise the number of gene_products each pair shares in common,
      in the gene_product/number_of_gps field

      For example, term_name = ribosome and correlated_term_name = protein biosynthesis
      should yeild a high value for number_of_gps, since these terms are
      biologically correlated

      does not use graph structure (direct associations only)

example_input: term_acc => SELECT acc FROM term
example_input: term_name => SELECT name FROM term ORDER BY name
example_input: correlated_term_type => biological_process, cellular_component, molecular_function
example_input: correlated_term_acc => SELECT acc FROM term
example_input: correlated_term_name => SELECT name FROM term ORDER BY name