Term Information [More information on catalytic step 2 spliceosome]

Accession
GO:0071013
Name
catalytic step 2 spliceosome
Ontology
cellular_component
Synonyms
mammalian spliceosomal complex C, mammalian spliceosomal complex C1, yeast spliceosomal complex A2-2
Definition
A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs. Source: GOC:krc, ISBN:0879697393, GOC:mah, ISBN:0879695897, GOC:ab, PMID:18322460, PMID:19239890
Comment
None
History
See term history for GO:0071013 at QuickGO
Subset
None
Community
GN Add usage comments for this term on the GONUTS wiki.
Feedback
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Graph of GO:0071013 from QuickGO

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Ancestors of catalytic step 2 spliceosome (GO:0071013)
subject[Reorder by subject] relation[Reorder by relation] object[Reorder by object]
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) biological_process (GO:0008150)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) cellular process (GO:0009987)
catalytic step 2 spliceosome [Inferred part_of relation] part_of (inferred) cellular_component (GO:0005575)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) metabolic process (GO:0008152)
catalytic step 2 spliceosome [Inferred part_of relation] part_of (inferred) cell (GO:0005623)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) cellular metabolic process (GO:0044237)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) nitrogen compound metabolic process (GO:0006807)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) organic substance metabolic process (GO:0071704)
catalytic step 2 spliceosome [Inferred part_of relation] part_of (inferred) cell part (GO:0044464)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) cellular aromatic compound metabolic process (GO:0006725)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) cellular nitrogen compound metabolic process (GO:0034641)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) heterocycle metabolic process (GO:0046483)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) organic cyclic compound metabolic process (GO:1901360)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) primary metabolic process (GO:0044238)
catalytic step 2 spliceosome [Inferred part_of relation] part_of (inferred) intracellular (GO:0005622)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) macromolecule metabolic process (GO:0043170)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) nucleobase-containing compound metabolic process (GO:0006139)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) cellular macromolecule metabolic process (GO:0044260)
catalytic step 2 spliceosome [Inferred part_of relation] part_of (inferred) intracellular part (GO:0044424)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) nucleic acid metabolic process (GO:0090304)
catalytic step 2 spliceosome [Inferred part_of relation] part_of (inferred) organelle (GO:0043226)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) gene expression (GO:0010467)
catalytic step 2 spliceosome [Inferred part_of relation] part_of (inferred) intracellular organelle (GO:0043229)
catalytic step 2 spliceosome [Inferred part_of relation] part_of (inferred) membrane-bounded organelle (GO:0043227)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) RNA metabolic process (GO:0016070)
catalytic step 2 spliceosome [Inferred part_of relation] part_of (inferred) intracellular membrane-bounded organelle (GO:0043231)
catalytic step 2 spliceosome [Inferred is_a relation] is_a (inferred) macromolecular complex (GO:0032991)
catalytic step 2 spliceosome [Inferred is_a relation] is_a (inferred) organelle part (GO:0044422)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) RNA processing (GO:0006396)
catalytic step 2 spliceosome [Inferred is_a relation] is_a (inferred) intracellular organelle part (GO:0044446)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) molecular_function (GO:0003674)
catalytic step 2 spliceosome [Inferred part_of relation] part_of (inferred) nucleus (GO:0005634)
catalytic step 2 spliceosome [Inferred is_a relation] is_a (inferred) ribonucleoprotein complex (GO:1990904)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) RNA splicing (GO:0008380)
catalytic step 2 spliceosome [Inferred capable_of relation] capable_of (inferred) catalytic activity (GO:0003824)
catalytic step 2 spliceosome [Inferred is_a relation] is_a (inferred) intracellular ribonucleoprotein complex (GO:0030529)
catalytic step 2 spliceosome [Inferred is_a relation] is_a (inferred) nuclear part (GO:0044428)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) RNA splicing, via transesterification reactions (GO:0000375)
catalytic step 2 spliceosome [Inferred capable_of part of relation] capable_of part of (inferred) second spliceosomal transesterification activity (GO:0000386)
catalytic step 2 spliceosome [is_a relation] is_a  spliceosomal complex (GO:0005681)
Children of catalytic step 2 spliceosome (GO:0071013)
subject[Reorder by subject] relation[Reorder by relation] object[Reorder by object]
U12-type catalytic step 2 spliceosome (GO:0071018) [is_a relation] is_a  catalytic step 2 spliceosome
U2-type catalytic step 2 spliceosome (GO:0071007) [is_a relation] is_a  catalytic step 2 spliceosome
None.