AmiGO 2: Term Details for "catalytic step 2 spliceosome" (GO:0071013)

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Term Information

Accession: GO:0071013
Name: catalytic step 2 spliceosome
Ontology: cellular_component
Synonyms: mammalian spliceosomal complex C, mammalian spliceosomal complex C1, yeast spliceosomal complex A2-2
Alternate IDs: None
Definition: A spliceosomal complex that contains three snRNPs, including U5, bound to a splicing intermediate in which the first catalytic cleavage of the 5' splice site has occurred. The precise subunit composition differs significantly from that of the catalytic step 1, or activated, spliceosome, and includes many proteins in addition to those found in the associated snRNPs. Source: PMID:18322460, PMID:19239890, GOC:krc, ISBN:0879697393, GOC:ab, ISBN:0879695897, GOC:mah
Comment: None
History: See term history for GO:0071013 at QuickGO
Subset: None
Related: Link to all genes and gene products annotated to catalytic step 2 spliceosome.; Link to all direct and indirect annotations to catalytic step 2 spliceosome.; Link to all direct and indirect annotations download (limited to first 10,000) for catalytic step 2 spliceosome.

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GO:0008150 biological_process
GO:0009987 cellular process
GO:0005575 cellular_component
GO:0008152 metabolic process
GO:0005623 cell
GO:0044237 cellular metabolic process
GO:0006807 nitrogen compound metabolic process
GO:0071704 organic substance metabolic process
GO:0044464 cell part
GO:0006725 cellular aromatic compound metabolic process
GO:0034641 cellular nitrogen compound metabolic process
GO:0046483 heterocycle metabolic process
GO:1901360 organic cyclic compound metabolic process
GO:0044238 primary metabolic process
GO:0005622 intracellular
GO:0043170 macromolecule metabolic process
GO:0006139 nucleobase-containing compound metabolic process
GO:0044260 cellular macromolecule metabolic process
GO:0044424 intracellular part
GO:0090304 nucleic acid metabolic process
GO:0043226 organelle
GO:0010467 gene expression
GO:0043229 intracellular organelle
GO:0043227 membrane-bounded organelle
GO:0016070 RNA metabolic process
GO:0043231 intracellular membrane-bounded organelle
GO:0032991 macromolecular complex
GO:0044422 organelle part
GO:0006396 RNA processing
GO:0044446 intracellular organelle part
GO:0003674 molecular_function
GO:0005634 nucleus
GO:1990904 ribonucleoprotein complex
GO:0008380 RNA splicing
GO:0003824 catalytic activity
GO:0030529 intracellular ribonucleoprotein complex
GO:0044428 nuclear part
GO:0000375 RNA splicing, via transesterification reactions
GO:1902494 catalytic complex
GO:0000386 second spliceosomal transesterification activity
GO:0005681 spliceosomal complex
GO:0071013 catalytic step 2 spliceosome
GO:0071018 U12-type catalytic step 2 spliceosome
GO:0071007 U2-type catalytic step 2 spliceosome

Parents of catalytic step 2 spliceosome (GO:0071013)

subject	relation	object
catalytic step 2 spliceosome	has_part	Prp19 complex (GO:0000974)
catalytic step 2 spliceosome	capable_of	second spliceosomal transesterification activity (GO:0000386)
catalytic step 2 spliceosome	is_a	catalytic complex (GO:1902494)
catalytic step 2 spliceosome	has_part	U5 snRNP (GO:0005682)
catalytic step 2 spliceosome	is_a	spliceosomal complex (GO:0005681)

Children of catalytic step 2 spliceosome (GO:0071013)

subject	relation	object
U12-type catalytic step 2 spliceosome (GO:0071018)	is_a	catalytic step 2 spliceosome
U2-type catalytic step 2 spliceosome (GO:0071007)	is_a	catalytic step 2 spliceosome

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