Term Information [More information on cytoplasmic pattern recognition receptor signaling pathway in response to virus]

Accession
GO:0039528
Name
cytoplasmic pattern recognition receptor signaling pathway in response to virus
Ontology
biological_process
Synonyms
cytoplasmic pattern recognition receptor signalling pathway in response to virus, virus-induced cytoplasmic pattern recognition receptor signaling pathway, RIG-I-like receptor (RLR) signaling pathway, RIG-I/MDA5 signaling pathway, RIG-like helicase signaling pathway, RIG-like receptor signaling pathway, RLH signaling pathway, RLR signaling pathway, cytoplasmic caspase-recruiting domain (CARD) helicase signaling pathway
Definition
Any series of molecular signals generated as a consequence of a virus or viral RNA binding to a pattern recognition receptor (PRR) located in the cytoplasm. Cytosolic PRRs such as RIG-I (DDX58) and MDA-5 (IFIH1) detect RNA synthesized during active viral replication and trigger a signaling pathway to protect the host against viral infection, for example by inducing the expression of antiviral cytokines. Source: PMID:18272355, GOC:bf, PMID:17328678, PMID:19531363
Comment
This term should be used for annotation when it is not known which cytoplasmic pattern recognition receptor (PRR) has detected the viral RNA. If the PRR is known, consider instead the child terms. The RIG-like family is composed of at least RIG-I (retinoic acid inducible gene I; also known as DDX58), melanoma differentiation-associated gene 5 (MDA5; also known as helicard or IFIH1) and LGP2.
History
See term history for GO:0039528 at QuickGO
Subset
None
Community
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Feedback
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Graph of GO:0039528 from QuickGO

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Ancestors of cytoplasmic pattern recognition receptor signaling pathway in response to virus (GO:0039528)
subject[Reorder by subject] relation[Reorder by relation] object[Reorder by object]
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) biological_process (GO:0008150)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) biological regulation (GO:0065007)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) regulation of biological process (GO:0050789)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) response to stimulus (GO:0050896)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred regulates relation] regulates (inferred) cellular process (GO:0009987)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) immune system process (GO:0002376)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) regulation of response to stimulus (GO:0048583)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) response to stress (GO:0006950)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) single-organism process (GO:0044699)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) defense response (GO:0006952)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) immune response (GO:0006955)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) positive regulation of biological process (GO:0048518)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) regulation of immune system process (GO:0002682)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) regulation of response to stress (GO:0080134)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) signaling (GO:0023052)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) single-organism cellular process (GO:0044763)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) cell communication (GO:0007154)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) cellular response to stimulus (GO:0051716)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred occurs_in relation] occurs_in (inferred) cellular_component (GO:0005575)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) innate immune response (GO:0045087)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) positive regulation of immune system process (GO:0002684)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) positive regulation of response to stimulus (GO:0048584)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) regulation of cellular process (GO:0050794)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) regulation of defense response (GO:0031347)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) regulation of immune response (GO:0050776)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) single organism signaling (GO:0044700)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred occurs_in relation] occurs_in (inferred) cell (GO:0005623)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) positive regulation of defense response (GO:0031349)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) positive regulation of immune response (GO:0050778)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) regulation of innate immune response (GO:0045088)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) signal transduction (GO:0007165)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) activation of immune response (GO:0002253)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred occurs_in relation] occurs_in (inferred) cell part (GO:0044464)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) immune response-regulating signaling pathway (GO:0002764)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) multicellular organismal process (GO:0032501)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) positive regulation of innate immune response (GO:0045089)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) response to biotic stimulus (GO:0009607)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) response to external stimulus (GO:0009605)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) activation of innate immune response (GO:0002218)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) immune response-activating signal transduction (GO:0002757)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred occurs_in relation] occurs_in (inferred) intracellular (GO:0005622)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) multi-organism process (GO:0051704)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) response to external biotic stimulus (GO:0043207)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) single-multicellular organism process (GO:0044707)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred positively_regulates relation] positively_regulates (inferred) cytokine production (GO:0001816)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) innate immune response-activating signal transduction (GO:0002758)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred occurs_in relation] occurs_in (inferred) intracellular part (GO:0044424)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) regulation of multicellular organismal process (GO:0051239)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) response to other organism (GO:0051707)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred occurs_in relation] occurs_in (inferred) cytoplasm (GO:0005737)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) defense response to other organism (GO:0098542)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) immune effector process (GO:0002252)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) intracellular receptor signaling pathway (GO:0030522)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) intracellular signal transduction (GO:0035556)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) pattern recognition receptor signaling pathway (GO:0002221)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) positive regulation of multicellular organismal process (GO:0051240)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred is_a relation] is_a (inferred) regulation of cytokine production (GO:0001817)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [Inferred part_of relation] part_of (inferred) response to virus (GO:0009615)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [is_a relation] is_a  cellular response to virus (GO:0098586)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [is_a relation] is_a  cytoplasmic pattern recognition receptor signaling pathway (GO:0002753)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [part_of relation] part_of  defense response to virus (GO:0051607)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [is_a relation] is_a  multi-organism cellular process (GO:0044764)
cytoplasmic pattern recognition receptor signaling pathway in response to virus [is_a relation] is_a  positive regulation of cytokine production (GO:0001819)
Children of cytoplasmic pattern recognition receptor signaling pathway in response to virus (GO:0039528)
subject[Reorder by subject] relation[Reorder by relation] object[Reorder by object]
MDA-5 signaling pathway (GO:0039530) [is_a relation] is_a  cytoplasmic pattern recognition receptor signaling pathway in response to virus
negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway (GO:0039532) [negatively_regulates relation] negatively_regulates  cytoplasmic pattern recognition receptor signaling pathway in response to virus
regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway (GO:0039531) [regulates relation] regulates  cytoplasmic pattern recognition receptor signaling pathway in response to virus
RIG-I signaling pathway (GO:0039529) [is_a relation] is_a  cytoplasmic pattern recognition receptor signaling pathway in response to virus
suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway (GO:0039537) [negatively_regulates relation] negatively_regulates  cytoplasmic pattern recognition receptor signaling pathway in response to virus
None.