Term Information [More information on tRNA splicing, via endonucleolytic cleavage and ligation]

Accession
GO:0006388
Name
tRNA splicing, via endonucleolytic cleavage and ligation
Ontology
biological_process
Synonyms
tRNA-Y splicing
Definition
Splicing of tRNA substrates via recognition of the folded RNA structure that brings the 5' and 3' splice sites into proximity and cleavage of the RNA at both the 3' and 5' splice sites by an endonucleolytic mechanism, followed by ligation of the exons. Source: GOC:krc, PMID:9582290, ISBN:0879695897
Comment
Note that while typically associated with tRNA splicing, splicing via endonucleolytic cleavages and subsequent ligation of the free exon ends is known to be used for some non-tRNA substrates, e.g. HAC1 (YFL031W) in S. cerevisiae and an intron in the 23S rRNA of the Archaeal species Desulfurococcus mobilis.
History
See term history for GO:0006388 at QuickGO
Subset
gosubset_prok
Community
GN Add usage comments for this term on the GONUTS wiki.
Feedback
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Graph of GO:0006388 from QuickGO

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Ancestors of tRNA splicing, via endonucleolytic cleavage and ligation (GO:0006388)
subject[Reorder by subject] relation[Reorder by relation] object[Reorder by object]
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred part_of relation] part_of (inferred) biological_process (GO:0008150)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) cellular process (GO:0009987)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred part_of relation] part_of (inferred) metabolic process (GO:0008152)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) cellular metabolic process (GO:0044237)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) nitrogen compound metabolic process (GO:0006807)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred part_of relation] part_of (inferred) organic substance metabolic process (GO:0071704)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) cellular aromatic compound metabolic process (GO:0006725)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) cellular nitrogen compound metabolic process (GO:0034641)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) heterocycle metabolic process (GO:0046483)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) organic cyclic compound metabolic process (GO:1901360)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) primary metabolic process (GO:0044238)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred part_of relation] part_of (inferred) macromolecule metabolic process (GO:0043170)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) nucleobase-containing compound metabolic process (GO:0006139)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) cellular macromolecule metabolic process (GO:0044260)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) nucleic acid metabolic process (GO:0090304)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred part_of relation] part_of (inferred) gene expression (GO:0010467)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) RNA metabolic process (GO:0016070)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) ncRNA metabolic process (GO:0034660)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) RNA processing (GO:0006396)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) ncRNA processing (GO:0034470)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) RNA splicing (GO:0008380)
tRNA splicing, via endonucleolytic cleavage and ligation [Inferred is_a relation] is_a (inferred) tRNA metabolic process (GO:0006399)
tRNA splicing, via endonucleolytic cleavage and ligation [is_a relation] is_a  RNA splicing, via endonucleolytic cleavage and ligation (GO:0000394)
tRNA splicing, via endonucleolytic cleavage and ligation [is_a relation] is_a  tRNA processing (GO:0008033)
Children of tRNA splicing, via endonucleolytic cleavage and ligation (GO:0006388)
subject[Reorder by subject] relation[Reorder by relation] object[Reorder by object]
tRNA exon ligation (GO:0000968) [part_of relation] part_of  tRNA splicing, via endonucleolytic cleavage and ligation
tRNA-type intron splice site recognition and cleavage (GO:0000379) [part_of relation] part_of  tRNA splicing, via endonucleolytic cleavage and ligation
None.