Term Information [More information on transcription factor activity, protein binding]

Accession
GO:0000988
Name
transcription factor activity, protein binding
Ontology
molecular_function
Synonyms
protein binding transcription factor activity, transcription factor activity
Definition
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in order to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well. Source: GOC:txnOH
Comment
Note that this term is in the subset of terms that should not be used for direct gene product annotation. This term does not provide specificity with respect to the type of protein binding, e.g. transcription factor binding or RNA polymerase binding. Please use a child term that provides that specificity or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
History
See term history for GO:0000988 at QuickGO
Subset
goslim_generic
goslim_candida
gocheck_do_not_manually_annotate
goslim_aspergillus
goslim_metagenomics
goslim_chembl
goslim_yeast
Community
GN Add usage comments for this term on the GONUTS wiki.
Feedback
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Contacting server...
View this term in QuickGO.

Graph of GO:0000988 from QuickGO

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Ancestors of transcription factor activity, protein binding (GO:0000988)
subject[Reorder by subject] relation[Reorder by relation] object[Reorder by object]
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) biological_process (GO:0008150)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) cellular process (GO:0009987)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) metabolic process (GO:0008152)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) biological regulation (GO:0065007)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) cellular metabolic process (GO:0044237)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) nitrogen compound metabolic process (GO:0006807)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) organic substance metabolic process (GO:0071704)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) biosynthetic process (GO:0009058)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) cellular aromatic compound metabolic process (GO:0006725)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) cellular nitrogen compound metabolic process (GO:0034641)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) heterocycle metabolic process (GO:0046483)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) organic cyclic compound metabolic process (GO:1901360)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) primary metabolic process (GO:0044238)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of biological process (GO:0050789)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) cellular biosynthetic process (GO:0044249)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) macromolecule metabolic process (GO:0043170)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) nucleobase-containing compound metabolic process (GO:0006139)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) organic substance biosynthetic process (GO:1901576)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of cellular process (GO:0050794)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of metabolic process (GO:0019222)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) aromatic compound biosynthetic process (GO:0019438)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) cellular macromolecule metabolic process (GO:0044260)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) cellular nitrogen compound biosynthetic process (GO:0044271)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) heterocycle biosynthetic process (GO:0018130)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) nucleic acid metabolic process (GO:0090304)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) organic cyclic compound biosynthetic process (GO:1901362)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of cellular metabolic process (GO:0031323)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of nitrogen compound metabolic process (GO:0051171)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of primary metabolic process (GO:0080090)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) macromolecule biosynthetic process (GO:0009059)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) nucleobase-containing compound biosynthetic process (GO:0034654)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of biosynthetic process (GO:0009889)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of macromolecule metabolic process (GO:0060255)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of nucleobase-containing compound metabolic process (GO:0019219)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) RNA metabolic process (GO:0016070)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of cellular biosynthetic process (GO:0031326)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of macromolecule biosynthetic process (GO:0010556)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of RNA metabolic process (GO:0051252)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) RNA biosynthetic process (GO:0032774)
transcription factor activity, protein binding [Inferred related_to relation] related_to (inferred) nucleic acid-templated transcription (GO:0097659)
transcription factor activity, protein binding [Inferred part_of relation] part_of (inferred) regulation of RNA biosynthetic process (GO:2001141)
transcription factor activity, protein binding [is_a relation] is_a  molecular_function (GO:0003674)
transcription factor activity, protein binding [part_of relation] part_of  regulation of nucleic acid-templated transcription (GO:1903506)
Children of transcription factor activity, protein binding (GO:0000988)
subject[Reorder by subject] relation[Reorder by relation] object[Reorder by object]
transcription factor activity, core RNA polymerase binding (GO:0000990) [is_a relation] is_a  transcription factor activity, protein binding
transcription factor activity, RNA polymerase II basal transcription factor binding (GO:0001083) [is_a relation] is_a  transcription factor activity, protein binding
transcription factor activity, RNA polymerase II transcription factor binding (GO:0001076) [is_a relation] is_a  transcription factor activity, protein binding
transcription factor activity, TFIIA-class binding (GO:0001086) [is_a relation] is_a  transcription factor activity, protein binding
transcription factor activity, TFIIB-class binding (GO:0001087) [is_a relation] is_a  transcription factor activity, protein binding
transcription factor activity, TFIID-class binding (GO:0001084) [is_a relation] is_a  transcription factor activity, protein binding
transcription factor activity, TFIIE-class binding (GO:0001088) [is_a relation] is_a  transcription factor activity, protein binding
transcription factor activity, TFIIF-class transcription factor binding (GO:0001089) [is_a relation] is_a  transcription factor activity, protein binding
transcription factor activity, TFIIH-class binding (GO:0001090) [is_a relation] is_a  transcription factor activity, protein binding
transcription factor activity, transcription factor binding (GO:0000989) [is_a relation] is_a  transcription factor activity, protein binding
transcriptional activator activity, RNA polymerase II transcription factor binding (GO:0001190) [is_a relation] is_a  transcription factor activity, protein binding
transcriptional repressor activity, RNA polymerase II activating transcription factor binding (GO:0098811) [is_a relation] is_a  transcription factor activity, protein binding
transcriptional repressor activity, RNA polymerase II transcription factor binding (GO:0001191) [is_a relation] is_a  transcription factor activity, protein binding
None.